Bibliography

Surugiu, V, Revkov NK, Todorova V, Papageorgiou N, Valavanis V, Arvanitidis C.  2010.  Spatial patterns of biodiversity in the Black Sea: An assessment using benthic polychaetes. Estuarine, Coastal and Shelf Science. 88(2):165-174. Abstract

Dailianis, T, Tsigenopoulos CS.  2010.  Characterization of polymorphic microsatellite markers for the endangered Mediterranean bath sponge Spongia officinalis L. Conservation Genetics. 11:1155-1158. Abstract

Katharios, P, Tsigenopoulos CS.  2010.  First report of nodavirus outbreak in cultured juvenile shi drum, Umbrina cirrosa L., in Greece. Aquaculture Research. 42:147-152.

Carvalho, GR, Creer S, Allen MJ, Costa FO, Tsigenopoulos CS, Le Goff-Vitry M, Magoulas A, Medlin L, Metfies K.  2010.  Genomics in the Discovery and Monitoring of Marine Biodiversity. Introduction to Marine Genomics. :1-32. Abstract

Fanini, L, ElGtari M, Fahd S, Scapini F.  2009.  Approccio locale all’educazione ambientale: lezioni da due esperienze in ambiente mediterraneo. National Conference Italian Society of Ecology.

Fanini, L, Defeo O, Scapini F.  2009.  Testing the Habitat Safety Hypothesis with behavioural field experiments: amphipod orientation on sandy beaches with contrasting morphodynamics. V Smposium on sandy beaches.

Mitter, K, Kotoulas G, Magoulas A, Mulero V, Sepulcre MP, Figueras A, Novoa B, Sarropoulou E.  2009.  Evaluation of candidate reference genes for QPCR during ontogenesis and of immune-relevant tissues of European seabass (Dicentrarchus labrax). Comp Biochem Physiol Part B. 153:340-347. Abstract

Lagnel, J, Tsigenopoulos CS, Iliopoulos I.  2009.  NOBLAST and JAMBLAST: New Options for BLAST and a Java Application Manager for BLAST results. Bioinformatics. 25:824-6. Abstract

Polymenakou, PN, Lampadariou N, Mandalakis M, Tselepides A.  2009.  Phylogenetic diversity of sediment bacteria from the southern Cretan margin, Eastern Mediterranean Sea. Syst Appl Microbiol. 32:17-26. Abstract

Pafilis, E, O'Donoghue SI, Jensen LJ, Horn H, Kuhn M, Brown NP, Schneider R.  2009.  Reflect: augmented browsing for the life scientist. Nature Biotechnology. 27(6):508-510.

Polymenakou, PN.  2009.  Exploring the deep sea microbial communities of the Eastern Mediterranean Sea. MicrobeGr-Workshop: Molecular approaches to unravel the hidden microbial work, University of Ioannina, Agrinio, Greece.

[Anonymous].  2009.  Caretta caretta lungo la costa ionica reggina: analisi dei parametri ecologici del litorale in relazione al pattern distributivo dei nidi. Department of Evolutionary Biology. :95.

Fanini, L.  2009.  Environmental policies in the Mediterranean. “Selected Environmental Issues in the Mediterranean Region”.

Papageorgiou, N.  2009.  Impact of aquaculture to the benthic macrofauna and the ecosystem functions . Biology Department. :130.

Oulas, A, Boutla A, Gkirtzou K, Reczko M, Kalantidis K, Poirazi P.  2009.  Prediction of novel microRNA genes in cancer-associated genomic regions--a combined computational and experimental approach. Nucleic Acids Research. 37(10):3276-3287.

[Anonymous].  2009.  Uso dell'orientamento di anfipodi litorali come indicatore ecologico per spiagge mediterranee ed atlantiche. Department of Evolutionary Biology. :62.

Pavlopoulos, GA, Pafilis E, Kuhn M, Hooper SD, Schneider R.  2009.  OnTheFly: a tool for automated document-based text annotation, data linking and network generation. Bioinformatics. 25(7):977-978.

Oulas, A, Reczko M, Poirazi P.  2009.  MicroRNAs and Cancer—The Search Begins!. IEEE Transactions on Information Technology in Biomedicine. 13(1):67-77.

Pafilis, E.  2009.  Web-based data integration and text mining techniques to accelerate biomedical research (PhD). Structural and Computational Biology, EMBL.

Somerfield, PJ, Arvanitidis C, Faulwetter S, Chatzigeorgiou G, Vasileiadou A, Amouroux JM, Anisimova N, Cochrane SJ, Craeymeersch J, Dahle S et al..  2009.  Assessing evidence for random assembly of marine benthic communities from regional species pools. Marine Ecology Progress Series. 382:279-286.

Borja, A, Rodrνguez JG, Black K, Bodoy A, Emblow C, Fernandes TF, Forte J, Karakassis I, Muxika I, Nickell TD et al..  2009.  Assessing the suitability of a range of benthic indices in the evaluation of environmental impact of fin and shellfish aquaculture located in sites across Europe. Aquaculture. 293(3-4):231-240. Abstract

Rossano, C, Gambineri S, Fanini L, Durier V, Rivault C, Scapini F.  2009.  Behavioural adaptations in talitrids from two Atlantic beaches. Estuarine Coastal and Shelf Science. 85:573-584.

Arvanitidis, C, Somerfield PJ, Rumohr H, Faulwetter S, Valavanis V, Vasileiadou A, Chatzigeorgiou G, Vanden Berghe E, Vanaverbeke J, Labrune C et al..  2009.  Biological geography of the European seas: results from the MacroBen database. Marine Ecology Progress Series. 382:265-278.

Arvanitidis, C, Somerfield PJ, Rumohr H, Faulwetter S, et al.  2009.  Biological geography of the European seas: results from the MacroBen database. International Congress on the Zoogeography, Ecology and Evolution of the Eastern Mediterranean.

Fodelianakis, S, Ladoukakis E, Papageorgiou N, Karakassis I.  2009.  Change of the benthic microbial diversity with distance from the fish cages. 9ο National Symposium on Oceanography and Fisheries, . Abstract