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Journal Article
Paterson, G, Ahmed F, Faulwetter S, Ball A, Dinley J, Hawkins L, Sykes D, Arvanitidis C.  Submitted.  The pros and cons of using micro-computed tomography in gross and micro-anatomical assessments of polychaetous annelids. Memoirs of the Victoria Museum.
Brown, C, Miltiadou D, Tsigenopoulos CS.  2015.  Prevalence and survival of escaped European seabass Dicentrarchus labrax in Cyprus identified using genetic markers. Aquaculture Environment Interactions. 7(1):49-59. Abstract
Gkafas, G, Tsigenopoulos CS, Magoulas A, Panagiotaki P, Vafidis D, Mamuris Z, Exadactylos A.  2013.  Population subdivision of saddled seabream Oblada melanura in the Aegean Sea revealed by genetic and morphometric analyses. Aquatic Biology. 18(1):69-80.
Manousaki, T, Hull PM, Kusche H, Machado-Schiaffino G, Franchini P, Harrod C, Elmer KR, Meyer A.  2013.  Parsing parallel evolution: ecological divergence and differential gene expression in the adaptive radiations of thick-lipped Midas cichlid fishes from Nicaragua. Mol Ecol. 22:650-69. Abstract
Tsagkarakou, A, Mouton L, Kristoffersen JB, Dokianakis E, Grispou M, Bourtzis K.  2012.  Population genetic structure and secondary endosymbionts of Q Bemisia tabaci (Hemiptera: Aleyrodidae) from Greece. Bulletin of Entomological Research. 102(3):353-365.
Chatzinikolaou, E, Richardson CA.  2010.  Parental size and environmental conditions affect egg capsule production by Nassarius reticulatus (Linnaeus 1758) (Gastropoda: Nassariidae). Journal of Experimental Marine Biology and Ecology. 390:14-21. Abstract
Kouridaki, I, Polymenakou PN, Tselepides A, Mandalakis M, Smith K.  2010.  Phylogenetic diversity of sediment bacteria from the deep Northeastern Pacific Ocean: a comparison to the deep Eastern Mediterranean Sea. International Microbiology. 13:143-150.
Tsigenopoulos, CS, Kasapidis P, Berrebi P.  2010.  Phylogenetic relationships of hexaploid large-sized barbs (genus Labeobarbus, Cyprinidae) based on mtDNA data. Molecular phylogenetics and evolution. 56:851-856. Abstract
Oulas, A, Boutla A, Gkirtzou K, Reczko M, Kalantidis K, Poirazi P.  2009.  Prediction of novel microRNA genes in cancer-associated genomic regions--a combined computational and experimental approach. Nucleic Acids Research. 37(10):3276-3287.
Polymenakou, PN, Lampadariou N, Mandalakis M, Tselepides A.  2009.  Phylogenetic diversity of sediment bacteria from the southern Cretan margin, Eastern Mediterranean Sea. Syst Appl Microbiol. 32:17-26. Abstract
Sarropoulou, E, Sepulcre MP, Poisa-Beiro L, Mulero V, Meseguer J, Figueras A, Novoa B, Terzoglou V, Reinhardt R, Magoulas A et al..  2009.  Profiling of infection specific mRNA transcripts of the European seabass Dicentrarchus labrax. BMC Genomics. 10:157. Abstract
Chatzinikolaou, E, Richardson CA.  2008.  Population dynamics and growth of Nassarius reticulatus (Gastropoda: Nassariidae) in Rhosneigr (Anglesey, UK). Marine Biology. 153:605-619. Abstract
Kristoffersen, JB, Magoulas A.  2008.  Population structure of anchovy Engraulis encrasicolus L. in the Mediterranean inferred from multiple methods. Fisheries Research. 91:187-195.
Patterson, DJ, Faulwetter S, Shipunov AB.  2008.  Principles for a names-based cyberinfrastructure to serve all of biology. Zootaxa. 1950:153-163.
Polymenakou, PN, Mandalakis M, Stephanou EG, Tselepides A.  2008.  Particle size distribution of airborne microorganisms and pathogens during an Intense African dust event in the eastern Mediterranean. Environ Health Perspect. 116:292-6. Abstract
Poulakakis, N, Antoniou A, Mantziou G, Skartsi T, Vasilakis D, Elorriaga J, de la Puente J, Gavashelishvili A, Ghasabyan M, Katzner T et al..  2008.  Population structure, diversity and phylogeography in the near threatened Eurasian Black Vulture Aegypius monachus (Falconiformes; Accipitridae) in Europe: insights from microsatellite and mtDNA variation. Biological Journal of Linnean Society. 95:859-872. Abstract
Vafidis, D, Leontarakis PK, Dailianis T, Kallianiotis A.  2008.  Population characteristics of four deep-water pandalid shrimps (Decapoda : Caridea) in the northern Aegean Sea (NE Mediterranean). Journal of Natural History. 42:2079–2093. Abstract
Kasapidis, P, Magoulas A, Mylonas M, Zouros E.  2005.  The phylogeography of the gecko Cyrtopodion kotschyi (Reptilia: Gekkonidae) in the Aegean archipelago. Mol Phylogenet Evol. 35:612-23. Abstract
Koulouri, P, Dounas C, Eleftheriou A.  2005.  Preliminary results on the effect of otter trawling on hyperbenthic communities in Heraklion Bay (Eastern Mediterranean, Cretan Sea). American Fisheries Society Symposium. 41:529-537. Abstract
Poulakakis, N, Lymberakis P, Tsigenopoulos CS, Magoulas A, Mylonas M.  2005.  Phylogenetic relationships and evolutionary history of snake-eyed skink Ablepharus kitaibelii (Sauria: Scincidae). Mol Phylogenet Evol. 34:245-56. Abstract
Santovito, A, Marin A, Zampicinini G, Girotti M, Bigatti MP, Lamberti L, Del Pero M, Selvaggi A, Cervella P.  2004.  Polymorphismes par insertion Alu dans trois populations du Nord de l'Italie. Antropo. (7):45–53. Abstract
Durand, JD, Tsigenopoulos CS, Unlu E, Berrebi P.  2002.  Phylogeny and biogeography of the family Cyprinidae in the Middle East inferred from cytochrome b DNA- evolutionary significance of this region. Mol Phylogenet Evol. 22:91-100. Abstract
Pollani, A, Triantafyllou G, Petihakis G, Nittis K, Dounas C, Koutitas C.  2001.  The Poseidon operational tool for the prediction of floating pollutant transport. Marine Pollution Bulletin. 43(7-12):270-278.
Arvanitidis, C.  2000.  Polychaete fauna of the Aegean Sea: inventory and new information. Bulletin of Marine Sciene. 66:73-96.
Kornilios, S, Drakopoulos PG, Dounas C.  1998.  Pelagic tar, dissolved/dispersed petroleum hydrocarbons and plastic distribution in the Cretan Sea, Greece. Marine Pollution Bulletin. 36(12):989-993.